Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933483.1_cds_XP_016479757.1_71266
CDS Infomation

[gene=LOC107801007] [db_xref=GeneID:107801007] [protein=calcium-dependent protein kinase 8-like] [protein_id=XP_016479757.1] [location=join(19340..19852,20964..21087,21177..21320,21986..22138,22257..22372,22541..22708,23157..23387,24792..24947)] [gbkey=CDS]
Sequence

ATGGGAAATTGCTGTGTGACACCTGGTAAATCTTCTGAGAAAAAGAAGAACAAGAAGAAC
AAACCAAACCCTTTTGCTATTGATTATGGGGCAACTCAATCATCAGCTGAAGGTGATGGA
AACAAGCTTGTTGTGTTAAAAGATCCAACAGGGCACAATATAAATGAAAAATATGATCTT
GGTCGTGAGCTCGGAAGAGGGGAATTTGGGGTTACATATTTATGTACTGATGTTGACACA
GGGGAGAAATATGCTTGTAAATCGATATCGAAGAAGAAACTTAGGACAGCTGTAGATATT
GATGATGTTAGGAGAGAGGTTGAGATCATGAAGCATTTGCCTAAGCATCCTAATATTGTT
ACCTTAAGGGATACTTATGAGGATGATAATGCAGTGCACATTGTGATGGAACTTTGTGAG
GGCGGTGAGTTGTTCGATCGGATTGTTGCTAGAGGACACTATACAGAGAGAGCAGCAGCT
GGTATTATGAGGACTATAGTCGAAGTTGTCCAGATGTGTCACAGGCATGGAGTAATGCAT
CGTGATCTCAAACCCGAGAACTTTCTCTTTGGTAACAAAAAAGAAACAGCTCCACTGAAG
GCTATTGACTTTGGGTTGTCGGTGTTTTTTAAACCTGGGGAACACTTTAATGAGATAGTG
GGAAGTCCTTATTACATGGCTCCAGAGGTCCTAAAACGCAATTATGGCCCGGAGGTTGAT
GTGTGGAGTGCTGGAGTTATTCTTTATATTCTTCTCTGCGGTGTTCCACCTTTCTGGGCA
GAGACTGAACAAGGAGTCGCCCAAGCAATTATTCGCTCTGTAGTTGATTTCAAGAGAGAT
CCATGGCCTAAGGTTTCTGATAATGCAAAGGATCTTGTAAAGAAGATGCTTGATCCAGAT
CCAACTCGACGGCTCACAGCTCAGCAAGTTCTTGAGCATACTTGGTTACAAAATATAAAG
AAAGCACCAAACGTCTCATTGGGCGAGACTGTCAAAGCAAGGCTCAAACAATTTTCAGTT
ATGAACAAGCTCAAGAAAAGAGCTTTAACGGTTATCGCGGAGTTTTTGTCAGCAGAGGAA
GTGGCTGGAATGAAGGAAGCATTTGACCAGATGGATACAGGAAAGAAAGGCAAGATTAAC
CTTGGAGAACTTAAAATTGGTCTTCAAAAGCTGGGCCATCAGATTCCTGATGCTGATCTT
CAGATTCTCATGGAAGCCGCTGATGTTGATAGAGATGGATATTTAAATTACGCGGAGTTT
GTCGCTGTATCGGTTCATCTAAGAAAAATGGCAAATGATGAGCACCTGCATAAAGCGTTT
TCATTTTTTGACAGAAATCAAAGTGGCTACATAGAAATCGAGGAGCTGCGCAGTGCCTTG
AGTGATGAGGATGATGGCAACAGTGAGGAAGTCATCAATGCTATTATGCATGATGTTGAC
ACTGACAAGGATGGTCGCATTAGTTACGAAGAATTTGCTGCAATGATGAAAGCTGGAACG
GATTGGAGAAAAGCATCGAGACAGTATTCTCGTGAACGTTTCAATAGTCTCAGCTTAAAA
TTGATGAGGGACGGTTCATTACAACTTGGAAGCGAGGCTAAATGA

Peptide Sequence

PEP ID

XP_016479757.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 8-like [Nicotiana tabacum]
Sequence

MGNCCVTPGKSSEKKKNKKNKPNPFAIDYGATQSSAEGDGNKLVVLKDPTGHNINEKYDL
GRELGRGEFGVTYLCTDVDTGEKYACKSISKKKLRTAVDIDDVRREVEIMKHLPKHPNIV
TLRDTYEDDNAVHIVMELCEGGELFDRIVARGHYTERAAAGIMRTIVEVVQMCHRHGVMH
RDLKPENFLFGNKKETAPLKAIDFGLSVFFKPGEHFNEIVGSPYYMAPEVLKRNYGPEVD
VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFKRDPWPKVSDNAKDLVKKMLDPD
PTRRLTAQQVLEHTWLQNIKKAPNVSLGETVKARLKQFSVMNKLKKRALTVIAEFLSAEE
VAGMKEAFDQMDTGKKGKINLGELKIGLQKLGHQIPDADLQILMEAADVDRDGYLNYAEF
VAVSVHLRKMANDEHLHKAFSFFDRNQSGYIEIEELRSALSDEDDGNSEEVINAIMHDVD
TDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMRDGSLQLGSEAK

Transcript Sequence

Gene sequence data has not been registered.